Diversity of onion nematode fauna in agrocenoses of different altitudinal zones in Fergana Valley, Uzbekistan
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Abstract. Kambarov S, Eshova K, Narzullayev S, To’xtasinov F, Zokirov O, Turdiev Z, Otakulov B, Tursunova S, Khujamov S. 2025. Diversity of onion nematode fauna in agrocenoses of different altitudinal zones in Fergana Valley, Uzbekistan. Biodiversitas 26: 4479-4489. During research conducted from 2020 to 2024, the biodiversity of nematode fauna associated with onion plants (Allium cepa) cultivated in agrocenoses across different altitudinal zones of the eastern part of the Fergana Valley was thoroughly investigated. As part of the study objectives, a total of 276 samples were collected from the onion root system and its surrounding rhizosphere soils during the spring, summer, and autumn seasons using the route survey method, of which nematodes were detected in 245 samples. The samples were processed following Berman's funnel technique. Based on the obtained results, 39 nematode species belonging to 7 orders and classified within the classes Adenophorea and Secernentea were identified in the onion root system and rhizosphere soils, representing 22 genera. An uneven distribution of the identified species across the altitudinal zones was observed. Within the faunal composition, species of the order Rhabditida were the most diverse in terms of species richness. The study demonstrated that nematode species composition and ecological structure vary significantly depending on the altitudinal zones. In the lower hill zone, 34 species were recorded, whereas 30 species were documented in the upper hill zone and 12 species in the lower mountain zone. This indicated a link between these patterns and the region's ecological characteristics. According to Bongers' classification, nematodes identified in onion fields were assigned as follows: 7 species to the Cp-1 group, 26 species to Cp-2, 2 species to Cp-3, 3 species to Cp-4, and 1 species to Cp-5. Aporcelaimellus obtusicaudatus (C-p 5), which occurred across all three zones, is considered a highly specialized and adaptable species. The results of the study provide a scientific basis for a deeper understanding of the region's biodiversity and for managing the dynamics of nematode fauna in agrocenoses.
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References
Abd Allah AM, El-Mehy AA, Abdel-Baset SH. 2023. Effect of intercropping onion with sugar beet on productivity of both crops and root-knot nematodes control under different onion plant densities and slow-release N fertilizer rates. J Plant Prod Sci 9 (1): 61-75. DOI: 10.21608/jpps.2020.157286.
Adylova NA. 1972. Helminths of onions. In: Helminths in Food Products. Abstracts of Reports from the Inter-Republican Scientific Conference, Samarkand University, Uzbekistan. [Russian]
Aksay G, Yavuzaslanoglu E. 2023. Status of onion production in Türkiye and in the world, effects of abiotic and biotic stress factors. Anatol J Bot 7 (1): 32-39. DOI: 10.30616/ajb.1240014.
Archidona-Yuste A, Cai R, Cantalapiedra-Navarrete C, Carreira JA, Rey A, Viñegla B, Liébanas G, Palomares-Rius JE, Castillo P. 2020. Morphostatic speciation within the dagger nematode Xiphinema hispanum-complex species (Nematoda: Longidoridae). Plants 9 (12): 1649. DOI: 10.3390/plants9121649.
Bardgett RD, van der Putten WH. 2014. Belowground biodiversity and ecosystem functioning. Nature 515: 505-511. DOI: 10.1038/nature13855.
Bazarbekov KU. 1970. The fauna of onion and garlic nematodes in Southeast Kazakhstan and measures for controlling Ditylenchus. [Dissertation]. Leningrad. [Russian]
Beesa N, Suwanngam A, Puttawong K, Phanbut P, Jindapunnapat K, Sasnarukkit A, Chinnasri B. 2023. First report of the root-knot nematode Meloidogyne graminicola on shallot (Allium cepa var. aggregatum) in Thailand. New Dis Rep 47 (1): e12158. DOI: 10.1002/ndr2.12158.
Bernard GC, Egnin M, Bonsi C. 2017. The impact of plant-parasitic nematodes on agriculture and methods of control. In: Shah MM, Mahamood M (eds). Nematology Concepts, Characteristics and Control. InTech Open, London. DOI: 10.5772/intechopen.68958.
Bongers T, Ferris H. 1999. Nematode community structure as a bioindicator in environmental monitoring. Trends Ecol Evol 14 (6): 224-228. DOI: 10.1016/s0169-5347(98)01583-3.
Bongers T. 1990. The maturity index: An ecological measure of environmental disturbance based on nematode species composition. Oecologia 83: 14-19. DOI: 10.1007/BF00324627.
Brinkman P, Teklu MG. 2022. Integrated nematode management of Ditylenchus dipsaci in onion: A nematode in a world all on its own. In: Sikora R, Desaeger J, Molendijk L (eds). Integrated Nematode Management: State-of-the-Art and Visions for the Future. CAB International, Wallingford. DOI: 10.1079/9781789247541.0041.
Carass A, Roy S, Gherman A, Reinhold JC, Jesson A, Arbel T, Maier O, Handels H, Ghafoorian M, Platel B, Birenbaum A, Greenspan H, Pham DL, Crainiceanu CM, Calabresi PA, Prince JL, Gray Roncal WR, Shinohara RT, Oguz I. 2020. Evaluating white matter lesion segmentations with refined Sørensen-Dice analysis. Sci Rep 10 (1): 8242. DOI: 10.1038/s41598-02064803-w
Chen J, Zhang Y, Liu C, Huang L. 2024. Distribution pattern of soil nematode communities along an elevational gradient in arid and semi-arid mountains of Northwest China. Front Plant Sci 15: 1466079. DOI: 10.3389/fpls.2024.1466079.
Chitwood BG. 1958. The Classification of plant parasitic nematodes and related forms // XV-th. International Congress of Zoology.
De Ley P, Blaxter ML. 2002. Systematic position and phylogeny. In: Lee DL (eds). The Biology of Nematodes. CRC Press, London.
Dong K, Moroenyane I, Tripathi B, Kerfahi D, Takahashi K, Yamamoto N, An C, Cho H, Adams J. 2017. Soil nematodes show a mid-elevation diversity maximum and elevational zonation on Mt. Norikura, Japan. Sci Rep 7: 3028. DOI: 10.1038/s41598-017-03655-3.
Eshova KS. 2016. Nematodes of arid areas of Uzbekistan. Eur J Biomed Pharm Sci 3 (12): 129-132.
Hajihassani A, Hamidi N, Dutta B, Tyson C. 2018. First report of stubby-root nematode, Paratrichodorus minor, on onion in Georgia, U.S.A. J Nematol 50 (3): 453-455. DOI: 10.21307/jofnem-2018-038.
Hammer Ø, Harper DAT, Ryan PD. 2001. PAST: Paleontological statistics software package for education and data analysis. Palaeontol Electron 4 (1): 1-9.
Hodda M. 2022. Phylum Nematoda: A classification, catalogue and index of valid genera, with a census of valid species. Zootaxa 5114 (1): 1-289. DOI: 10.11646/zootaxa 5114.1.1.
Karimova MM. 1974. Dynamics of nematode fauna during the main developmental phases of onion Allium sativa L. Proceedings of Scientific Conferences, Moscow. [Russian]
Kholikov RY. 2020. Fergana Valley (Natural Geography). Monograph, Tashkent.
Konate AY, Ouuedraogo SL, Kone D. 2019. Etude faunistique des nématodes phytoparasites de l’oignon (Allium cepae L., Alliaceae) au Burkina Faso. Intl J Biol Chem Sci 13 (3): 1388-1395. DOI: 10.4314/IJBCS.V13I3.14. [French]
Kumar M, Barbhai MD, Hasan M et al. 2022. Onion (Allium cepa L.) peels: A review on bioactive compounds and biomedical activities. Biomed Pharmacother 146: 112498. DOI: 10.1016/j.biopha.2021.112498.
Lu Q, Liu T, Wang N, Dou Z, Wang K, Zuo Y. 2020. A review of soil nematodes as biological indicators for the assessment of soil health. Front Agric Sci Eng 7 (3): 275-281. DOI: 10.15302/j-fase-2020327.
Maina S, Karuri H, Ng’endo RN. 2021. Free-living nematode assemblages associated with maize residues and their ecological significance. J Nematol 53: e2021-38. DOI: 10.21307/jofnem-2021-038.
Malysheva NS, Tarasova TV. 2019. Biological diversity of nematodes of vegetable crops in the Kursk region. In: Natural and Technical Sciences: Global Challenges, Trends, Opportunities. Proceedings of the International Scientific and Practical Conference, May, Belgorod, Rusia.
Moulton R, Jiang Y. 2018. Maximally consistent sampling and the Jaccard index of probability distributions. International Conference on Data Mining 2018: 347-356. DOI: 10.1109/ICDM.2018.00050.
Mirzaev UN, Kuchboev AE, Mavlyanov O, Amirov OO, Narzullayev SB. 2024. Morphological and molecular characterization of root-knot nematodes from Uzbekistan. Biosyst Divers 32 (1): 135-141. DOI: 10.15421/012413.
Muhammad B, Bibi K, Khan MS, Kiran A. 2024. Association of plant parasitic nematodes with some vegetable crops of Khyber Pakhtunkhwa, Pakistan. Alex Sci Exch J 45 (1): 21-25. DOI: 10.21608/asejaiqjsae.2024.335700.
Narzullayev S, Kambarov S, Mirzaev U, Tursunova S. 2023. Diversity of woody plant nematodes in a specially protected biocenosis of Zarafshan Mountain, Uzbekistan. Biodiversitas 24 (6): 3145-3151. DOI: 10.13057/biodiv/d240607.
Narzullayev SB, Mirzaev UN, Mavlyanov O, Khakimov N, Jabborov AR, Khamidova AB, Tursunova SS, Khujamov S, Baysariyeva C, Ashrapov AA, Nurmatova DM. 2024. Diversity and habitat distribution of tomato (Solanum lycopersicum) nematode fauna (Zarafshan valley, Uzbekistan). Acta Biol Sibirica 10: 1147-1164. DOI: 10.5281/zenodo.13937701.
Narzullayev SB, Subbotin SA. 2025. Characterisation of some gall-forming nematodes of the family Anguinidae from Uzbekistan. Russ J Nematol 33 (1): 1-7. DOI: 10.24412/0869-6918-2025-1-1-7.
Narzullayev SB. 2022. New data on the vertical distribution of nematode communities in mountain ecosystems of Mount Zarafshan, Uzbekistan. Biodiversitas 23 (8): 3967-3975. DOI: 10.13057/biodiv/d230814.
National Atlas of Uzbekistan. 2020. Natural Conditions and Resources, Ecology, and Environmental Protection of the Republic of Uzbekistan, Tashkent.
National Statistics Committee. 2025. Agriculture. https://stat.uz/uz/rasmiy-statistika/agriculture-2.
Nurmatova DM, Narzullayev SB, Mavlyanov O, Khakimov N, Jabborov AR, Boltayev KS, Mirzaev UN, Ashrapov AA, Tursunova SS, Khujamov S. 2025. Trophic structure and soil depth stratification as ecological drivers of taxonomic and species diversity in the nematode community in Central Asian peach orchards. Acta Biol Sibirica 11 (1): 477-493. DOI: 10.5281/zenodo.15347466.
Özturk L, Behmand T, Sin B, Avci GG, Elekcio?lu IH. 2018. Morphologic and molecular identification of Xiphinema americanum associated with pine trees. Intl J Mol Biol 3 (3): 96-98. DOI: 10.15406/ijmboa.2018.03.00058.
Peralta-Ccayahuallpa VA, Casa-Coila VH, Lima-Medina I, Cuadros-Fernández LA, Macedo-Valdivia DG. 2024. Characterization of Meloidogyne spp. and population density of phytoparasitic nematodes associated with Alliaceae crops in the Arequipa region, Peru. Sci Agropec 15 (2): 289-299. DOI: 10.17268/sci.agropecu.2024.022.
Riascos-Ortiz D, Caicedo-Castro J, Arboleda-Riascos C, Sánchez F, Mosquera-Espinosa AT, De Agudelo FV. 2023. Morpho-molecular characterization of Ditylenchus dipsaci and alternatives for its management in green onion Allium fistulosum crops from Colombia. Agric Sci 14 (11): 1516-1534. DOI: 10.4236/as.2023.1411098.
Rizayeva SM. 1984. Nematodes of major vegetable crops and potatoes in the northeastern zone of Uzbekistan. Author's abstract of dissertation for the degree of Candidate of Biological Sciences, Tashkent. [Russian]
Sekara A, Pokluda R, Del Vacchio L, Somma S, Caruso G. 2017. Interactions among genotype, environment, and agronomic practices on production and quality of storage onion (Allium cepa L.) - A review. Hortic Sci 44 (1): 21-42. DOI: 10.17221/92/2015-hortsci.
Suyadi, Sila S, Samuel J. 2021. Nematode diversity indices application to determine the soil health status of Lembo agroecosystem in West Kutai, East Kalimantan Province, Indonesia. Biodiversitas 22 (7): 2861-2869. DOI: 10.13057/biodiv/d220737.
Van Bezooijen J. 2006. Methods and Techniques for Nematology. Revised Version. Wageningen University, Wageningen.
Wilschut RA, Geisen S. 2021. Nematodes as drivers of plant performance in natural systems. Trends Plant Sci 26 (3): 237-247. DOI: 10.1016/j.tplants.2020.10.006.
Yavuzaslanoglu E, Aksay G, Delen B, Çetinkaya A. 2020. The interaction of the mycorrhizae of the fungus Rhizophagus irregularis (Walker & Schüßler, 2010) (Glomerales: Glomeraceae) and the stem and bulb nematode (Ditylenchus dipsaci Kühn, 1857) (Tylenchida: Anguinidae) on the onion plant (Allium cepa L.) (Asparagales: Amaryllidaceae). Türkiye Biyolojik Mücadele Dergisi 12 (2): 120-129. DOI: 10.31019/tbmd.959958.
Yavuzaslanoglu E, Sonmezoglu OA, Genc N, Akar ZM, Ocal A, Karaca MS, Elekcioglu IH, Ozsoy VS, Aydogdu M. 2019. Occurrence and abundance of nematodes on onion in Turkey and their relationship with soil physicochemical properties. Nematology 21 (10): 1063-1079. DOI: 10.1163/15685411-00003275.
Yeates GW, Bongers T, De Goede RGM, Freckman DW, Georgieva SS. 1993. Feeding habits in soil nematode families and genera-An outline for soil ecologists. J Nematol 25 (3): 315-331.
Yeates GW. 2003. Nematodes as soil indicators: Functional and biodiversity aspects. Biol Fertil Soils 37: 199-210. DOI: 10.1007/s00374-003-0586-5.
Zhang Y, Li S, Li H, Wang R, Zhang K-Q, Xu J. 2020. Fungi-nematode interactions: Diversity, ecology, and biocontrol prospects in agriculture. J Fungi 6 (4): 206. DOI: 10.3390/jof6040206.