Phylogeny of Wolbachia in Drosophila mutant from Bandung, Indonesia
##plugins.themes.bootstrap3.article.sidebar##
Issue
Section
Articles
This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.
##plugins.themes.bootstrap3.article.main##
Abstract
Abstract. Kusmintarsih ES, Gemilang P, Nuryanto A, Mahmoud HHA, Ambarningrum TB. 2024. Phylogeny of Wolbachia in Drosophila mutant from Bandung Indonesia. Biodiversitas 25: 4894-4899. Wolbachia is a microorganism known as an intracellular endosymbiont in arthropods that causes reproductive changes and most commonly cytoplasmic incompatibility. Wolbachia pipientis A has been divided into two major subgroups (A and B) and 17 subgroups. Therefore, the present study aims to determine the presence of Wolbachia subgroup in Drosophila mutants and to analyze the phylogeny, of Wolbachia in Drosophila mutants using Wolbachia surface protein (wsp) primer genes. The presence of Wolbachia was determined based on the DNA band pattern on the agarose gel. The phylogenetic relationship among Wolbachia in Drosophila mutants was inferred from a phylogenetic tree. Based on the neighbor-joining method, the phylogenetic tree reconstruction was done in MEGA X software. The result shows that Wolbachia from 7 types of Drosophila mutant samples (taxi, ebony, dumpy, miniature, sepia, white, eye missing, in one subgroup as Wolbachia sp. wMel isolate Yunnan outer surface protein precursor (wsp) gene, partial cds., while between samples and out-group is closely related to Wolbachia sp. in Diabrotica cristata 16S rRNA sub-group A. This result is the first systematic survey of Wolbachia in Drosophila mutants and the first survey classifying Wolbachia infections by subgroup. The research future is to explore Wolbachia in many more insects.
##plugins.themes.bootstrap3.article.details##
References
REFERENCES
Altinli M, Filiz Gunay, Bulent Alten, Mylene Weill and Mathieu Sicard. 2018. Wolbachia diversity and cytoplasmic incompatibility patterns in Culex pipiens populations in Turkey. Parasites & Vectors Open access 11:198 https://doi.org/10.1186/s13071-018-2777-9
Amit Sinha, Zhiru Li, Luo Sun, and Clotilde KS Carlow. 2019. Complete Genome Sequence of the Wolbachia wAlbB Endosymbiont of Aedes albopictus. Genome Biol Evol. 11(3): 706-720. Doi. 10.1093/gbe/evz025
Beckmann, J. F., Ronau, J. A., & Hochstrasser, M., 2017. A Wolbachia deubiquitylating enzyme induces cytoplasmic incompatibility. Nature microbiology, 2(5), 17007.
Bennett, G. M, Norma A. Pantoja, and Patrick M. O’Grady. 2012. Diversity and phylogenetic relationships of Wolbachia in Drosophila and other native Hawaiian insects. Fly, 6 Issue 4:273-283
Bilousov OO, Kozeretska IA, Katanaev VL. Role of the gene Miniature in Drosophila wing maturation. Genesis. 2012 50(7):525-33. doi: 10.1002/dvg.22016. Epub 2012 Mar 9. PMID: 22290933.
Camerota, M., Simoni, S., Di Giaimo, R., Bouneb, M., & Roversi, P. F. 2016. Influences of Wolbachia (Rickettsiales Rickettsiaceae) on the cellular response to cold stress in Drosophila melanogaster (Diptera Drosophilidae). Redia, 98(1), pp. 145-148.
Clark, M.E., Anderson, C.L., Cande, J., Karr, T.L. 2005. Widespread preval_____ence of Wolbachia in laboratory stocks and the implications for Drosophila research. Genetic 170(4): 1667-1675.
Damian, A., Dabert, M., & Gerth, M. 2015. New Wolbachia supergroups detected in quill mites (Acari: Syringophilidae). Infection, Genetics, and Evolution, 30, 140-146.
Endang Srimurni Kusmintarsih. 2009. Horizontal Transfer of the “Popcorn-Effect” Strain of Wolbachia from Drosophila melanogaster to Stomoxys calcitrans Microbiology Indonesia, 3, No 3:1978-3477
Eric J Sazama, Scot P Ouellette, Jeff S.W. 2019. Bacterial Endosymbionts Are Common Among, but not Necessarily Within, Insect Species. Environmental Entomology. 48, I. ssue. Pages 127–133, https://doi.org/10.1093/ee/nvy188
Grant L Hughes and Jason L Rasgon. 2014. Transinfection: a method to investigate Wolbachia-host interactions and control arthropod-borne disease. Insect Mol Biol. 23(2):141-151
Guruprasad, N. M., Jalali, S. K., & Puttaraju, H. P. 2014. Wolbachia-a foe for mosquitoes. Asian Pacific j. of trop. disease, 4(1), pp. 78.
Hartwell, L. 2017. Genetics: From Genes To Genomes. 4th ed. McGraw-Hill Companies, Inc: New York.
Helena S. M., Virgínia E. C., Denise S., André L Paranhos P. C. Luis M. 2011. Variations in the sensitivity of different primers for detecting Wolbachia in Anastrepha (diptera: tephritidae). Braz. J. Microbiol. 42, No.2. http://doi.org/10.1590/S1517-83822011000200046
Jeyaprakash and M. A. Hoy. 2000. Long PCR improves Wolbachia DNA amplification: Wsp sequences found in 76% of sixty-three arthropod species. Insect Molecular Biology. Royal Entomological Society.
Kandasamy S, Couto K, Thackeray J. 2021. A docked mutation phenocopies dumpy oblique alleles via altered vesicle trafficking. Peer J. 13;9:e12175. doi: 10.7717/peerj.12175. PMID: 34721959; PMCID: PMC8520396.
Keroack, C. D., Wurster, J. I., Decker, C. G., Williams, K. M., Slatko, B. E., Foster, J. M., & Williams, S. A. 2016. Absence of the filarial endosymbiont Wolbachia in seal heartworm (Acanthocheilonema spirocauda) but evidence of ancient lateral gene transfer. The J. of Parasitol., 102(3), pp. 312-318.
Khosravi G, Akbarzadeh K, Karimian F, Koosha M, Saeedi S, Oshaghi MA. 2024. A survey of Wolbachia infection in brachyceran flies from Iran. PLoS ONE 19 (5): e0301274
Kim J, Suh H, Kim S, Kim K, Ahn C, Yim J. 2006. Identification and characteristics of the structural gene for the Drosophila eye color mutant sepia, encoding PDA synthase, a member of the omega class glutathione S-transferases. Biochem J. (3):451-60. doi: 10.1042/BJ20060424.
Kirsten M. E.., Lisa K.., Kristina N. S, Kostas B., Siv G. E. Andersson. 2013. Comparative Genomics of Wolbachia and the Bacterial Species Concept. Open access. PLOS Genetics. 9. Issue 4:1-18.
Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Mol Biol Evol 35 (6): 1547-1549. DOI: 10.1093/molbev/msy096
Lefoulon E, et al. 2016. Breakdown of coevolution between symbiotic bacteria Wolbachia and their filarial hosts. Peer J 4:e1840.
Lo N, Paraskevopoulos C, Bourtzis K, O’Neill L, Werren JH, Bordenstein SR, Bandi C. 2007. Taxonomic status of the intracellular bacterium Wolbachia pipientis. Internat. J. of Syst and Evol Microb.
, pp. 654-657.
Ma, Y., Chen, W. J., Li, Z. H., Zhang, F., Gao, Y., & Luan, Y. X. 2017. Revisiting the phylogeny of Wolbachia in Collembola. Ecology and evolution, 7(7), pp. 2009-2017.
Mateos, M., Martinez, H., Lanzavecchia, S. B., Conte, C., Guillen, K., Moran-Aceves, B. M., & Kyritsis, G. A. 2018. Wolbachia pipientis associated to tephritid fruit fly pests: from basic research to applications. bioRxiv, 358333.
Min, K.T., & Benzer, S., 1997. Wolbachia, normally a symbiont of, can be virulent, causing degeneration and early death. Proc. of The Nat Acad of Sci of The United States of America. 94, pp. 10792-10796.
Moretti R, G., Augusto M., Elena L., and Maurizio C. 2018. Cytoplasmic incompatibility management to support Incompatible Insect Technique against Aedes albopictus. Parasites & Vectors. 11(Suppl 2):649. Open access. Page 1 of 11 doi:10.1017/S0007485315000085 © Cambridge University Press.
Newby LM, Jackson FR. 1991. Drosophila ebony mutants have altered circadian activity rhythms but normal eclosion rhythms. J Neurogenet. 7(2-3):85-101. doi: 10.3109/01677069109066213.
de Oliveira D.S†. Gonçalves †, L.A. Baton, P.H. F. Shimabukuro, Carvalho, F.D. and Moreira L.A. 2015. Broader preval_____ence of Wolbachia in insects including potential human disease vectors. Bull of Entomol Res. Page 1 of 11 doi:10.1017/S0007485315000085 © Cambridge University Press
Ravikumar, H., Ramachandraswamy, N., & Puttaraju, H. P. 2011. Molecular strain typing of Wolbachia infection from Indian mosquitoes using Wsp gene. Asian Pacific J. of Trop. Dis. 1(2), 106-109.
Richardson, M. F., Weinert, L. A., Welch, J. J., Linheiro, R. S., Magwire, M. M., Jiggins, F. M., & Bergman, C. M. 2012. Population genomics of the Wolbachia endosymbiont in Drosophila melanogaster. PLoS Genetics, 8(12), e1003129.
Scola, B. L., Bandi, C., & Raoult, D. 2015. Wolbachia. Bergey's Manual of Systematics of Archaea and Bacteria, 1-12.
Serbus, L. R., White, P. M., Silva, J. P., Rabe, A., Teixeira, L., Albertson, R., & Sullivan, W. 2015. The impact of host diet on Wolbachia titer in Drosophila. PLoS Pathogens, 11(3), e1004777.
Shropshire, J. D., Rosenberg, R, and. Bordenstein, S. R. 2021. The impacts of cytoplasmic incompatibility factor (cifA and cifB) genetic variation on phenotypes. GENETICS. 217(1). 1-13. DOI: 10.1093/genetics/iyaa007
Skelton, E., Rances, E., Frentiu, F. D., Kusmintarsih, E. S., Iturbe-Ormaetxe, I., Caragata, E. P., & O’Neill, S. L. 2015. A native Wolbachia Endosymbiont does not limit dengue virus infection in the mosquito Aedes notoscriptus (Diptera: Culicidae). J. of med. entomol, 53(2), pp. 401-408.
Sri Anggraeni, Suhara, Diah Kusumawaty, and Riandi, 2018. Pengenalan Mutan Drosophila. Departemen Pendidikan Biologi. Fakultas Pendidikan Matematika Dan Ilmu Pengetahuan Alam Universitas Pendidikan Indonesia. Bandung.
Strunov, A., Schneider, D. I., Albertson, R., and Miller, W. J. 2017. Restricted distribution and lateralization of mutualistic Wolbachia in the Drosophila brain. Cell. Microb., 19(1), e12639.
Sukmawati, I., Corebima, A. D., & Zubaidah, S. 2016. Fekunditas dan Waktu Perkembangan D. Melanogaster Strain Wildtype, White, dan Ebony pada Lingkungan Bersuhu Tinggi dan Pemanfaatannya sebagai Sumber Belajar Perkuliahan Genetika. Jurnal Pendidikan: Teori, Penelitian, dan Pengembangan, 1(5), pp. 814-821.
Uday, J, Sampath Kumar, H.P. Putaraju. 2015. Detection and Phylogenetic Affiliation of Wolbachia Endosymbiont from Drosophila melanogaster (India). Entomol. News, 124(4):270-276.http://doi.org/10.3157/021.124.0404
Van Vaerenberghe, K. 2023. Genetic and Environmental Contributions to Wolbachia-Induced Cytoplasmic Incompatibility. Thesis. University of Ottawa, Ottawa, Canada,
Varte V, Kairamkonda S, Gupta U, Manjila SB, Mishra A, Salzberg A, Nongthomba U. 2022. Neuronal role of taxi is imperative for flight in Drosophila melanogaster. doi: 10.1016/ j.gene.2022.146593.
Weasner BM, Weasner BP, Neuman SD, Bashirullah A, Kumar JP. 2016. Retinal Expression of the Drosophila eyes absent Gene Is Controlled by Several Cooperatively Acting Cis-regulatory Elements. PLoS Genet. 2016 Dec 8;12(12):e1006462. doi: 10.1371/journal.pgen.1006462. PMID: 27930646; PMCID: PMC5145141.
Xiao, C., Qiu, S. & Robertson, R.M. 2017. The white gene controls copulation success in Drosophila melanogaster . Sci Rep 7, 7712 (2017). https://doi.org/10.1038/s41598-017-08155-y
Yu. Yu. Ilinsky and Zakharov. 2011. Cytoplasmic incompatibility in Drosophila melanogaster is caused by different Wolbachia genotypes. Russ J. of Genetics: Applied Research, 1, No. 5, pp. 458–462
Most read articles by the same author(s)
- DIAN BHAGAWATI, AGUS NURYANTO, ELLY TUTY WINARNI, ANASTASIA ENDANG PULUNGSARI, Morphological and molecular characterization of mole crab (Genus: Emerita) in the Cilacap coastlines of Indonesia, with particular focus on genetic diversity of Emerita sp. nov. , Biodiversitas Journal of Biological Diversity: Vol. 23 No. 5 (2022)
- DIAH MUSTIKASARI, AGUS NURYANTO, SUHESTRI SURYANINGSIH, Phylogeography of Aplocheilus panchax in Indonesia, with special focus on the Bangka Island population , Biodiversitas Journal of Biological Diversity: Vol. 23 No. 4 (2022)
- SRI RIANI, ROMANUS EDY PRABOWO, AGUS NURYANTO, Molecular characteristics and taxonomic status of morphologically similar barnacles (Amphibalanus) assessed using the cytochrome c oxidase 1 gene , Biodiversitas Journal of Biological Diversity: Vol. 22 No. 3 (2021)
- MOHAMMED A. MOHAMMED, AGUS NURYANTO, ENDANG SRIMURNI KUSMINTARSIH, Genetic differentiation of dengue vector Aedes aegypti in the small geographical scale of Banyumas District, Indonesia based on Cytochrome Oxidase I , Biodiversitas Journal of Biological Diversity: Vol. 22 No. 2 (2021)
- AGUS NURYANTO, DIAN BHAGAWATI, KUSBIYANTO, Evaluation of conservation and trade status of marine ornamental fish harvested from Pangandaran Coastal Waters, West Java, Indonesia , Biodiversitas Journal of Biological Diversity: Vol. 21 No. 2 (2020)
- KUSBIYANTO, DIAN BHAGAWATI, AGUS NURYANTO, DNA barcoding of Crustacean larvae in the eastern areas of Segara Anakan Cilacap, Central Java Indonesia , Biodiversitas Journal of Biological Diversity: Vol. 21 No. 10 (2020)
- AGUS NURYANTO, GINA AMALIA, DAINTY KHAIRANI, HENDRO PRAMONO, DIAN BHAGAWATI, Molecular characterization of four giant gourami strains from Java and Sumatra , Biodiversitas Journal of Biological Diversity: Vol. 19 No. 2 (2018)
- AGUS NURYANTO, NUNUNG KOMALAWATI, SUGIHARTO, Genetic diversity assessment of Hemibagrus nemurus from rivers in Java Island, Indonesia using COI gene , Biodiversitas Journal of Biological Diversity: Vol. 20 No. 9 (2019)
- NUNING SETYANINGRUM, W. LESTARI, KRISMONO, AGUS NURYANTO, Genetically continuous populations of Striped Snakehead (Channa striata) in the Cingcingguling River fragmented by Sempor Reservoir, Central Java, Indonesia , Biodiversitas Journal of Biological Diversity: Vol. 23 No. 1 (2022)
- NUNING SETYANINGRUM, WINDIARIANI LESTARI, KRISMONO, AGUS NURYANTO, Exploitation of striped snakehead (Channa striata) in Sempor Reservoir, Central Java, Indonesia: A proposed conservation strategy , Biodiversitas Journal of Biological Diversity: Vol. 23 No. 7 (2022)