Short Communication: Diversity of cellulolytic bacteria isolated from coastal mangrove sediment in Logending Beach, Kebumen, Indonesia
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Abstract. Pramono H, Mariana A, Ryandini D, Sudiana E. 2021. Short Communication: Diversity of cellulolytic bacteria isolated from coastal mangrove sediment in Logending Beach, Kebumen, Indonesia. Biodiversitas 22: 1869-1878. Bacteria from mangrove sediments have the potential to produce active enzymes and metabolites needed in the industry. Mangrove ecosystems in various parts of Indonesia have been explored as sources of bacteria. However, the mangrove ecosystems in Logending Beach, Kebumen District, Indonesia are still unexplored. This study aims to determine the diversity of cellulolytic bacteria using the 16S rRNA gene. Ninety-nine bacteria were isolated from Logending coastal mangrove sediments. Most of them (87.87%) had a cellulolytic activity, with the cellulolytic index values ranged from 0.25–13.96. The LG2 isolate had the highest cellulolytic activity (13.96). Molecular characterization of the LG2 isolate based on the 16S rRNA gene showed that it was similar to the Fictibacillus nanhaiensis strain JSM 082006. This result is new information on cellulolytic bacteria and might be used as a future source of cellulolytic enzymes.
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REFERENCE
Ambeng, H Zubair, NP Oka, A Tonggiroh, 2019. Isolation and characterization of bacteria from mangrove sediment at coastal area in Pangkep South Sulawesi. The 3rd International Conference On Science. Journal of Physics: Conference Series 1341. 022016. IOP Publishing doi:10.1088/1742-6596/1341/2/022016
Behera BC, Parida S, Dutta SK, Thatoi HN. 2014. Isolation and Identification of Cellulose Degrading Bacteria from Mangrove Soil of Mahanadi River Delta and Their Cellulase Production Ability. American Journal of Microbiological Research, 2014, Vol. 2, No. 1, 41-46
Basak P, Pramanik A, Sengupta S, Nag S, Bhattachharyya A, Pattanayak R, Ghosh A. Chattopadhyay D, Roy D, Bhattacharyya M. 2016. Bacterial diversity assessment of pristine mangrove microbial community from Dhulibhashani, Sundarbans using 16S rRNA gene tag sequencing. Genomic Data .76-78
Bibi F, Ullah I, Akhtar S, Yasir M, Kensarah EA, AL-Ghamadi AAK, Azhar EI,. Diversity and bioprospecting potential of rhizo and endophytic bacteria from two mangrove plants in Saudi Arabia. African Journal of Microbiology Research Vol. 11(19), pp. 729-739, doi: 10.5897/AJMR2017.8552
Chantarasiri A.2015. Aquatic Bacillus cereus JD0404 isolated from the muddy sediments of mangrove swamps in Thailand and characterization of its cellulolytic activity. Egyptian Journal of Aquatic Research Vol 41. 257-264.
Chen Y, Wang W, Zhou D, Jing T, Li K, Zhao Y, Tang W, Qi D, Zhang M., Zang, X., Luo, Y., Xie, J. 2020. Biodegradation of lignocellulosic agricultural residues by a newly isolated Fictibacillus sp. YS-26 improving carbon metabolic properties and functional diversity of the rhizosphere microbial community, Bioresource Technology, doi: https://doi.org/10.1016/j.biortech.2020.123381
Facharial E, Anggraini S, Harmileni, Titania, Saryono N. 2019. Isolation and molecular identification of carbohydrase and proteaseproducing Bacillus subtilis JCM 1465 isolated from Penen Hot Springs in North Sumatra, Indonesia. Biodiversitas.Vol. 20 (12), Pages: 3493-3498
Glaeser SP, Dolt W, Busse HJ, Kampfer P,.2013. Fictibacillus phosphorivorans gen. nov., sp. nov.and proposal to reclassify Bacillus arsenicus, Bacillus barbaricus, Bacillus macauensis, Bacillus nanhaiensis, Bacillus rigui, Bacillus solisalsi and Bacillus gelatini in the genus Fictibacillus. International Journal of Systematic and Evolutionary Microbiology.63, 2934–2944 DOI 10.1099/ijs.0.049171-0
Globalakrishnan R & Sivakumar K,. 2017. Systematic characterization of potential cellulolytic marine Actinobacteria Actinoalloteichus sp. MHA15. Biotechnology Reports. 13.30-36.
Gupta P, Samant K, Sahu A, 2012. Isolation of Cellulose-Degrading Bacteria and Determination of Their Cellulolytic Potential. International Journal of Microbiology Volume 2012, Article ID 578925, 5 pages doi:10.1155/2012/578925
Hastuti SU, Sangur K, Khasanah HN., 2015. Biodiversity and Enzyme Activity of Indigenous Cellulolytic and Amylolytic Bacteria in Decayed Mangrove Stem Waste Product at Waai Seashore, Ambon Island . Journal of Agricultural Science and Technology B 5 (2015) 252-256 doi: 10.17265/2161-6264/2015.04.004
Junior FLS, Dias ACF, Fasanella CC, Taketani RG, Souze Lima AO, Melo IS, Andreote FD, 2013. Endo- and exo glucanase activities in bacteria from mangrove sediment. Brazilian Journal of Microbiology 44, 3, 969-976. www.sbmicrobiologia.org.br.
Kurniawan A, Puspitasari S, Asriani E, Kurniawan A, Sambah AB, Prihanto AA. 2019. Molecular Identification of Cellulolytic Bacteria From Mangrove Sediment at Tin Minning Region In West Bangka . International Journal of Applied Biology
Kurniawan A, Prihanto AA, Sari SP, Febriyanti D, Kurniawan A, Sambah AB, Asriani E,. 2017. Isolation and Identification of cellulolytic bacteria from mangrove sediment in Bangka Island ASEAN-FEN INTERNATIONAL FISHERIES SYMPOSIUM – 2017 IOP Publishing IOP Conf. Series: Earth and Environmental Science 137. 012070 doi :10.1088/1755-1315/137/1/012070
Liu M, Huiqin H, Bao S, Tong Y. 2019. Microbial community structure of soils in Bamenwan mangrove wetland. Scientific Reports 2019. 9: 8406 https://doi.org/10.1038/s41598-019-44788-x
Maharsiwi W, Astuti RI, Meryandini A, Wahyudi AT,. 2020. Screening and characterization of sponge-associated bacteria from Seribu Island, Indonesia producing cellulase and laccase enzymes. BIODIVERSITAS.Vol.21. No.3. 975-981. DOI: 10.13057/biodiv/d210317
Mendez LW, Tsai SM, 2014. Variations of Bacterial Community Structure and Composition in Mangrove Sediment at Different Depths in Southeastern Brazil. Diversity. 6.827-843. doi:10.3390/d6040827
Naresh S, Kunasundari B, Gunny AAN, Teoh YP, Shuit SH, Ng QH, Hoo PY. 2019. Isolation and Partial Characterisation of Thermophilic Cellulolytic Bacteria from North Malaysian Tropical Mangrove Soil. Tropical Life Sciences Research, 30(1), 123–147, 2019
Nursyirwani N, Feliatra F, Tanjung A, Harjuni F,. 2020. Isolation of Cellulolytic Bacteria from Mangrove Sediment inDumai Marine Station Riau and the Antibacterial Activity against Pathogens. The 8th International and National Seminar on Fisheries and Marine Science IOP Conf. Series: Earth and Environmental Science 430 (2020) 012012. IOP Publishing doi:10.1088/1755-1315/430/1/012012
Sakhia N, Sunil P, Shetty V, Bhatt S, Bhadalkal A, 2016. Study of Bacterial diversity of Mangrove Rhizosphere. Open Journal of Marine Science. Vol 6. 23-31. http://dx.doi.org/10.4236/ojms.2016.61003
Thompson C E, Beys-da-Silva W O, Santi L, Berger M, Vainstein M H, Guimarães J A, Vasconcelos A T R. 2013. A potential source for cellulolytic enzyme discovery and environmental aspects revealed through metagenomics of Brazilian mangroves. AMB Express. 3:65
Zhang CJ, Pan J, Duan CH, WangYM, Liu Y, Sun J, Zhou HC, Song X, Li M. 2019.Prokaryotic diversity in mangrove sedimentsacross southeastern China fundamentally differs from that in other biomes. mSystems4: e00442-19. https://doi.org/10.1128/ mSystems.00442-19.
Ambeng, H Zubair, NP Oka, A Tonggiroh, 2019. Isolation and characterization of bacteria from mangrove sediment at coastal area in Pangkep South Sulawesi. The 3rd International Conference On Science. Journal of Physics: Conference Series 1341. 022016. IOP Publishing doi:10.1088/1742-6596/1341/2/022016
Behera BC, Parida S, Dutta SK, Thatoi HN. 2014. Isolation and Identification of Cellulose Degrading Bacteria from Mangrove Soil of Mahanadi River Delta and Their Cellulase Production Ability. American Journal of Microbiological Research, 2014, Vol. 2, No. 1, 41-46
Basak P, Pramanik A, Sengupta S, Nag S, Bhattachharyya A, Pattanayak R, Ghosh A. Chattopadhyay D, Roy D, Bhattacharyya M. 2016. Bacterial diversity assessment of pristine mangrove microbial community from Dhulibhashani, Sundarbans using 16S rRNA gene tag sequencing. Genomic Data .76-78
Bibi F, Ullah I, Akhtar S, Yasir M, Kensarah EA, AL-Ghamadi AAK, Azhar EI,. Diversity and bioprospecting potential of rhizo and endophytic bacteria from two mangrove plants in Saudi Arabia. African Journal of Microbiology Research Vol. 11(19), pp. 729-739, doi: 10.5897/AJMR2017.8552
Chantarasiri A.2015. Aquatic Bacillus cereus JD0404 isolated from the muddy sediments of mangrove swamps in Thailand and characterization of its cellulolytic activity. Egyptian Journal of Aquatic Research Vol 41. 257-264.
Chen Y, Wang W, Zhou D, Jing T, Li K, Zhao Y, Tang W, Qi D, Zhang M., Zang, X., Luo, Y., Xie, J. 2020. Biodegradation of lignocellulosic agricultural residues by a newly isolated Fictibacillus sp. YS-26 improving carbon metabolic properties and functional diversity of the rhizosphere microbial community, Bioresource Technology, doi: https://doi.org/10.1016/j.biortech.2020.123381
Facharial E, Anggraini S, Harmileni, Titania, Saryono N. 2019. Isolation and molecular identification of carbohydrase and proteaseproducing Bacillus subtilis JCM 1465 isolated from Penen Hot Springs in North Sumatra, Indonesia. Biodiversitas.Vol. 20 (12), Pages: 3493-3498
Glaeser SP, Dolt W, Busse HJ, Kampfer P,.2013. Fictibacillus phosphorivorans gen. nov., sp. nov.and proposal to reclassify Bacillus arsenicus, Bacillus barbaricus, Bacillus macauensis, Bacillus nanhaiensis, Bacillus rigui, Bacillus solisalsi and Bacillus gelatini in the genus Fictibacillus. International Journal of Systematic and Evolutionary Microbiology.63, 2934–2944 DOI 10.1099/ijs.0.049171-0
Globalakrishnan R & Sivakumar K,. 2017. Systematic characterization of potential cellulolytic marine Actinobacteria Actinoalloteichus sp. MHA15. Biotechnology Reports. 13.30-36.
Gupta P, Samant K, Sahu A, 2012. Isolation of Cellulose-Degrading Bacteria and Determination of Their Cellulolytic Potential. International Journal of Microbiology Volume 2012, Article ID 578925, 5 pages doi:10.1155/2012/578925
Hastuti SU, Sangur K, Khasanah HN., 2015. Biodiversity and Enzyme Activity of Indigenous Cellulolytic and Amylolytic Bacteria in Decayed Mangrove Stem Waste Product at Waai Seashore, Ambon Island . Journal of Agricultural Science and Technology B 5 (2015) 252-256 doi: 10.17265/2161-6264/2015.04.004
Junior FLS, Dias ACF, Fasanella CC, Taketani RG, Souze Lima AO, Melo IS, Andreote FD, 2013. Endo- and exo glucanase activities in bacteria from mangrove sediment. Brazilian Journal of Microbiology 44, 3, 969-976. www.sbmicrobiologia.org.br.
Kurniawan A, Puspitasari S, Asriani E, Kurniawan A, Sambah AB, Prihanto AA. 2019. Molecular Identification of Cellulolytic Bacteria From Mangrove Sediment at Tin Minning Region In West Bangka . International Journal of Applied Biology
Kurniawan A, Prihanto AA, Sari SP, Febriyanti D, Kurniawan A, Sambah AB, Asriani E,. 2017. Isolation and Identification of cellulolytic bacteria from mangrove sediment in Bangka Island ASEAN-FEN INTERNATIONAL FISHERIES SYMPOSIUM – 2017 IOP Publishing IOP Conf. Series: Earth and Environmental Science 137. 012070 doi :10.1088/1755-1315/137/1/012070
Liu M, Huiqin H, Bao S, Tong Y. 2019. Microbial community structure of soils in Bamenwan mangrove wetland. Scientific Reports 2019. 9: 8406 https://doi.org/10.1038/s41598-019-44788-x
Maharsiwi W, Astuti RI, Meryandini A, Wahyudi AT,. 2020. Screening and characterization of sponge-associated bacteria from Seribu Island, Indonesia producing cellulase and laccase enzymes. BIODIVERSITAS.Vol.21. No.3. 975-981. DOI: 10.13057/biodiv/d210317
Mendez LW, Tsai SM, 2014. Variations of Bacterial Community Structure and Composition in Mangrove Sediment at Different Depths in Southeastern Brazil. Diversity. 6.827-843. doi:10.3390/d6040827
Naresh S, Kunasundari B, Gunny AAN, Teoh YP, Shuit SH, Ng QH, Hoo PY. 2019. Isolation and Partial Characterisation of Thermophilic Cellulolytic Bacteria from North Malaysian Tropical Mangrove Soil. Tropical Life Sciences Research, 30(1), 123–147, 2019
Nursyirwani N, Feliatra F, Tanjung A, Harjuni F,. 2020. Isolation of Cellulolytic Bacteria from Mangrove Sediment inDumai Marine Station Riau and the Antibacterial Activity against Pathogens. The 8th International and National Seminar on Fisheries and Marine Science IOP Conf. Series: Earth and Environmental Science 430 (2020) 012012. IOP Publishing doi:10.1088/1755-1315/430/1/012012
Sakhia N, Sunil P, Shetty V, Bhatt S, Bhadalkal A, 2016. Study of Bacterial diversity of Mangrove Rhizosphere. Open Journal of Marine Science. Vol 6. 23-31. http://dx.doi.org/10.4236/ojms.2016.61003
Thompson C E, Beys-da-Silva W O, Santi L, Berger M, Vainstein M H, Guimarães J A, Vasconcelos A T R. 2013. A potential source for cellulolytic enzyme discovery and environmental aspects revealed through metagenomics of Brazilian mangroves. AMB Express. 3:65
Zhang CJ, Pan J, Duan CH, WangYM, Liu Y, Sun J, Zhou HC, Song X, Li M. 2019.Prokaryotic diversity in mangrove sedimentsacross southeastern China fundamentally differs from that in other biomes. mSystems4: e00442-19. https://doi.org/10.1128/ mSystems.00442-19.
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