The antagonistic activity of marine actinomycetes from mangrove ecosystem against phytopathogenic fungi Colletotrichum sp. KA
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Abstract. Fadhilah QG, Santoso I, Yasman. 2021. The antagonistic activity of marine actinomycetes from mangrove ecosystem against phytopathogenic fungi Colletotrichum sp. KA. Biodiversitas 22: 642-649. Marine actinomycetes from mangrove ecosystems are known to be potential antifungal-producing isolates against phytopathogenic fungi. The aim of this research was to obtain potential marine actinomycetes isolates against the phytopathogenic fungi Colletotrichum sp. KA. Screening of 15 marine actinomycetes isolates using a dual culture method with a plug technique showed that 80% of isolates have antagonistic activity, represented as a percentage of growth inhibition range from 47.96% to 84.94%. Among 12 potential isolates, six isolates (SM4, SM11, SM14, SM15, SM18, and SM20) were evaluated for delayed antagonistic activity with incubation periods of 6, 9, and 12 days using the plug and streak techniques. The results showed that the percentage of growth inhibition of selected isolates inclined to increase along with the incubation period prior to inoculation of Colletotrichum sp. KA. Delayed antagonist assays using the streak technique resulted in higher inhibition results compared to the plug technique. Furthermore, the non-delayed assays of the two selected isolates, SM11 and SM15, also inhibited Colletotrichum sp. KA 57.99% and 59.88%, respectively. The delayed antagonist assay with a shorter incubation period of the two selected isolates also showed an increased percentage of growth inhibition of Colletotrichum sp. KA. According to our research, the delayed antagonistic assay of marine actinomycetes isolates with a 12-day incubation period using a plug technique was representative to evaluate the percentage of growth inhibition.
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References
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Chen Y, Zhou D, Qi D, Gao Z, Xie J, Luo Y. 2018. Growth promotion and disease suppression ability of a Streptomyces sp. CB-75 from banana rhizosphere soil. Front. Microbiol. 8: 1-18.
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Sengupta S, Pramanik A, Ghosh A, Bhattacharyya M. 2015. Antimicrobial activities of actinomycetes isolated from unexplored regions of Sundarbans mangrove ecosystem. BMC Microbiol. 15: 170-185.
Shrivastava P, Kumar R, Yandigeri MS. 2017. In vitro biocontrol activity of halotolerant Streptomyces aureofaciens K20: a potent antagonist against Macrophomina phaseolina (Tassi) Goid. Saudi J. Biol. Sci. 24: 192-199.
Solanki R, Khanna M, Lal R. 2008. Bioactive compounds from marine actinomycetes. Indian J. Microbiol. 48: 410-431.
Song L, Jiang N, Wei S, Lan S, Pan L. 2020. Isolation, screening, and identification of actinomycetes with antifungal and enzyme activity assays against Colletotrichum dematium of Sarcandra glabra. Mycology 28: 37-43.
Subramani R, Aalbersberg W. 2012. Marine actinomycetes: an ongoing source of novel bioactive metabolites. Microbiol. Res. 167: 571-580.
Subramani R, Sipkema D. 2019. Marine rare actinomycetes: a promising source of structurally diverse and unique novel natural products. Mar. Drugs 17: 1-40.
Viaene T, Langendries S, Beirincks S, Maes M, Goormachtig S. 2016. Streptomyces as a plant’s best friend?. FEMS Microbiol. Ecol. 92: 1-10.
Xu D, Ye W, Han Y, Deng Z, Hong K. 2014. Natural products from mangrove actinomycetes. Mar. Drugs 12: 2590-2613.
Yu M, Li Y, Banakar SP, Liu L, Shao C, Li Z, Wang C. 2019. New metabolites from the co-culture of marine-derived actinomycetes Streptomyces rochei MB037 and fungus Rhinocladiella similis 35. Front. Microbiol. 10: 1-11.
Alfisyahri R, Santoso I, Yasman. 2018. Isolation and screening antimicrobial activity of actinomycetes from sediment’s coastal Pramuka Island, Kepulauan Seribu, Jakarta, Indonesia. AIP Conf. Proc. 2023: 1-5.
Azman A, Othman I, Velu SS, Chan K, Lee L. 2015. Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity. Front. Microbiol. 6: 1-15.
Bader J, Mast-Gerlach E, Popovic MK, Bajpai R, Stahl U. 2010. Relevance of microbial co-culture fermentations in biotechnology. J. Appl. Microbiol. 109: 371-387.
Barka EA, Vasta P, Sanchez L, Gaveau-Vaillant N, Jacquard C, Klenk H, Clément C, Ouhdouch Y, van Wezel GP. 2016. Taxonomy, physiology, and natural products of actinobacteria. Microbiol. Mol. Biol. Rev. 80: 1-44.
Bressan W. 2003. Biological control of maize seed pathogenic fungi by use of actinomycetes. Biol. Control. 48: 233-240.
Chen Y, Zhou D, Qi D, Gao Z, Xie J, Luo Y. 2018. Growth promotion and disease suppression ability of a Streptomyces sp. CB-75 from banana rhizosphere soil. Front. Microbiol. 8: 1-18.
Chitraselvi RPE. 2018. Actinomycetes: dependable tool for sustainable agriculture. Curr. Investig. Agric. Curr. Res. 1: 128-130.
Crawford DL, Lynch JM, Whipps JM, Ousley MA. 1993. Isolation and characterization of actinomycetes antagonists of a fungal root pathogen. Appl. Environ. Microbiol. 59: 3899-3905.
Davies-Bolorunduro OF, Adeleye IA, Akinleye MO, Wang PG. 2019. Anticancer potential of metabolic compounds from marine actinomycetes isolated from Lagos Lagoon sediment. J. Pharm. Anal. 9: 201-208.
Dean R, van Kan JAL, Pretorius ZA, Hammond-Kosack KE, Pietro AD, Spanu PD, Rudd JJ, Dickman M, Kahmann R, Ellis J, Foster GD. 2012. The top 10 fungal pathogens in molecular plant pathology. Mol. Plant. Pathol. 13: 414-430.
Fadhilah QG, Santoso I, Yasman. 2018. Isolation and screening antibacterial activity of actinomycetes from mangrove ecosystem, Pramuka Island, Kepulauan Seribu, Jakarta, Indonesia. AIP Conf. Proc. 2023: 1-6.
Haidar R, Roudet J, Bonnard O, Dufour MC, Corio-Costet MF, Fert M, Gautier T, Deschamps A, Fermaud M. 2016. Screening and modes of action of antagonistic bacteria to control the fungal pathogen Phaeomoniella chlamydospora involved in grapevine trunk disease. Microbiol. Res. 192: 172-184.
Hindorf H, Omondi CO. 2011. A review of three major fungal disease of Coffee arabica L. in the rainforest of Ethiopia and progress in breeding for resistance in Kenya. J. Adv. Res. 2: 109-120.
Intra B, Mungsuntisuk I, Nihira T, Igarashi Y, Panbangred W. 2011. Identification of actinomycetes from plant rhizospheric soils with inhbitory activity against Colletotrichum spp., the causative agent of anthracnose disease. BMC Res. Notes. 498: 1–9.
Janardhan A, Kumar AP, Viswanath B, Saigopal DVR, Narasimha G. 2014. Production of bioactive compounds by actinomycetes and their antioxidant properties. Biotechnol. Res. Int. 2014: 1-8.
Jiao W, Yuan W, Li Z, Li J, Li L, Sun J, Gui Y, Wang J, Ye B, Lin H. 2018. Anti-MRSA actinomycins D1-D4 from the marine sponge-associated Streptomyces sp. LHW52447. Tetrahedron 74: 5914-5919.
Khamna S, Yokota A, Peberdy JF, Lumyong S. 2009. Antifungal activity of Streptomyces spp. isolated from rhizosphere of Thai medicinal plants. Int. J. Integr. Biol. 6: 143-147.
Khucharoenphaisan K, Sinma K, Lorrungruang C. 2013. Efficiency of actinomycetes against phytopathogenic fungis of chilli anthracnose. J. Appl. Sci. 13: 472-478.
Martauli ED. 2018. Analisis produksi kopi di Indonesia. J. Agribisnis Sci. 10: 112-120.
Mohseni M, Norouzi H, Hamedi J, Roohi A. 2013. Screening of antibacterial producing actinomycetes from sediments of the Caspian sea. Int. J. Mol. Cell. Med. Spring 2: 64-71.
Pendergrast M. 2010. Uncommon Grounds: the History of Coffee and How It Transformed Our World. Basic Books, New York.
Pimentel-Elardo SM, Kozytska S, Bugni TS, Ireland CM, Moll H, Hentschel U. 2010. Anti-parasitic compounds from streptomyces sp. strains isolated from Mediterranean sponges. Mar. Drugs 8: 373-380.
Qi D, Zou L, Zhou D, Chen Y, Gao Z, Feng R, Zhang M, Li K, Xie J, Wang W. 2019. Taxonomy and broad-spectrum antifungal activity of Streptomyces sp. SCA3-4 isolated from rhizosphere soil of Opuntia stricta. Front. Microbiol. 10: 1-15.
Sengupta S, Pramanik A, Ghosh A, Bhattacharyya M. 2015. Antimicrobial activities of actinomycetes isolated from unexplored regions of Sundarbans mangrove ecosystem. BMC Microbiol. 15: 170-185.
Shrivastava P, Kumar R, Yandigeri MS. 2017. In vitro biocontrol activity of halotolerant Streptomyces aureofaciens K20: a potent antagonist against Macrophomina phaseolina (Tassi) Goid. Saudi J. Biol. Sci. 24: 192-199.
Solanki R, Khanna M, Lal R. 2008. Bioactive compounds from marine actinomycetes. Indian J. Microbiol. 48: 410-431.
Song L, Jiang N, Wei S, Lan S, Pan L. 2020. Isolation, screening, and identification of actinomycetes with antifungal and enzyme activity assays against Colletotrichum dematium of Sarcandra glabra. Mycology 28: 37-43.
Subramani R, Aalbersberg W. 2012. Marine actinomycetes: an ongoing source of novel bioactive metabolites. Microbiol. Res. 167: 571-580.
Subramani R, Sipkema D. 2019. Marine rare actinomycetes: a promising source of structurally diverse and unique novel natural products. Mar. Drugs 17: 1-40.
Viaene T, Langendries S, Beirincks S, Maes M, Goormachtig S. 2016. Streptomyces as a plant’s best friend?. FEMS Microbiol. Ecol. 92: 1-10.
Xu D, Ye W, Han Y, Deng Z, Hong K. 2014. Natural products from mangrove actinomycetes. Mar. Drugs 12: 2590-2613.
Yu M, Li Y, Banakar SP, Liu L, Shao C, Li Z, Wang C. 2019. New metabolites from the co-culture of marine-derived actinomycetes Streptomyces rochei MB037 and fungus Rhinocladiella similis 35. Front. Microbiol. 10: 1-11.
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