Diversity of endophytic fungi from the root bark of Syzygium zeylanicum, and the antibacterial activity of fungal extracts, and secondary metabolite

##plugins.themes.bootstrap3.article.main##

SYARIFAH
ELFITA
HARY WIDJAJANTI
ARUM SETIAWAN
ALFIA R. KURNIAWATI

Abstract

Abstract. Syarifah, Elfita, Widjajanti H, Setiawan A, Kurniawati AR. 2021. Diversity of endophytic fungi from the root bark of Syzygium zeylanicum, and the antibacterial activity of fungal extracts, and secondary metabolite. Biodiversitas 22: 4572-4582. The decoction of the root bark of Syzygium zeylanicum has been used as traditional medicine, such as for treating pathogenic bacterial infections. Endophytic fungi that live in medicinal plant tissues have a high species diversity and biological activities correlate with their host. Therefore, this study aimed to explore the diversity of endophytic fungi from the root bark of S. zeylanicum and to determine the antibacterial activity of endophytic fungi and their secondary metabolites. In this study, we isolate and identify the endophytic fungi from the root bark of S. zeylanicum, continued by screening their antibacterial activity against two Gram-negative bacteria (Escherichia coli InaCCB5 and Salmonella thypi ATCC1048 and two Gram-positive bacteria (Staphylococcus aureus InaCCB4 and Bacillus subtilis InaCCB1204) by the Kirby-Bauer method. The fungal extract with the highest antibacterial activity proceeded with the isolation and determination of the structure of their bioactive compounds. The isolates were morphologically identified. Isolates that showed strong antibacterial activity were identified by molecular identification. Isolation of bioactive compounds was carried out by chromatographic techniques and the determination of the structure of pure chemical compounds was performed by the spectroscopic analysis. In total, there were 8 isolates of endophytic fungi were obtained from the root bark of S. zeylanicum, namely SZR1 – SZR8. SZR2 isolate has the highest antibacterial activity. Molecular identification through phylogenetic analysis showed that SZR2 isolate had high similarity with Penicillium brefeldianum. Isolation of bioactive compounds from SZR2 produced compound 1 in the form of light yellow crystals which showed strong antibacterial activity against S. typhi, E. coli, and B. subtilis with MIC values of 64 g/mL. Compound 1 was identified as p-hydroxybenzaldehyde, which was also obtained in its host. In conclusion, the endophytic fungus Penicillium brefeldianum produces similar secondary metabolites and antibacterial activity as its host plant.

##plugins.themes.bootstrap3.article.details##

References
Ahrenfeldt, Johanne et al. 2017. Bacterial Whole Genome-Based Phylogeny: Construction of a New Benchmarking Dataset and Assessment of Some Existing Methods. BMC Genomics 18(1): 1–13
Ancheeva, E., Daletos G, and Proksch P. 2020. Bioactive Secondary Metabolites from Endophytic Fungi. Current medicinal chemistry 27(11): 1836–54.
Anoop, M V, and A R Bindu. 2015. In-Vitro Anti-Inflammatory Activity Studies on Syzygium zeylanicum (L.) DC Leaves. International Journal of Pharma Research & Review 4(8): 18.
Arora, Jaya, and K. G. Ramawat. 2017. An Introduction to Endophytes. Springer, Cham: 1–23.
Bhanu, Devi R C, and K K Sabu. 2017. Analysis of Micronutrients in Syzygium zeylanicum Var . Zeylanicum Fruits. IJFSN 2(4): 168–72.
Budiono B, Elfita E, Muharni M, Yohandini H and Widjajanti H. 2019. Antioxidant activity of Syzygiumsa marangense L. and their endophytic fungi. Molekul. 14(1), 48-55.
Chadwick, D. J., and J Marsh. 2008. Bioactive compound from Plants. Wiley.
Cummings, N. J. et al. 2016. Diversity of Root-Endophytic Trichoderma from Malaysian Borneo. Mycological Progress 15(5).
Deepika, Nandagopal, Jothiramshekar Saranya, Palanisami Eganathan, and Puthiyapurayil Sujanapal. 2014. Antimicrobial Activity of Syzygium zeylanicum (L.) DC. and Syzygium Hemisphericum (Walp.) Alston. Journal of Biologically Active Products from Nature 4(2): 120–24.
Ding, Lijian et al. 2019. Production of New Antibacterial 4-Hydroxy-?-Pyrones by a Marine Fungus Aspergillus Niger Cultivated in Solid Medium. Marine Drugs 17(6).
Diongue, Khadim et al. 2019. A Comparative Study on Phenotypic versus ITS-Based Molecular Identification of Dermatophytes Isolated in Dakar, Senegal. International Journal of Microbiology 2019.
El-Hawary, Seham S. et al. 2020. Natural Product Diversity from the Endophytic Fungi of the GenusAspergillus. RSC Advances 10(37): 22058–79.
Elfita et al. 2019. Antibacterial Activity of Cordyline Fruticosa Leaf Extracts and Its Endophytic Fungi Extracts. Biodiversitas 20(12): 3804–12.
Fitriarni, Dian, and Rina Sri Kasiamdari. 2018. Isolation and Identification of Endophytic Fungi from Leave and Stem of Calopogonium Mucunoides. Journal of Tropical Biodiversity and Biotechnology 3(1): 30.
Gao, N., Shang, Z. C., Yu, P., Luo, J., Jian, K. L., Kong, L. Y., & Yang, M. H. 2017. Alkaloids from the endophytic fungus Penicillium brefeldianum and their cytotoxic activities. Chinese Chemical Letters, 28(6), 1194-1199.
Gherbawy, Y., Kesselboth, C., Elhariry, H., & Hoffmann, K. 2010. Molecular barcoding of microscopic fungi with emphasis on the mucoralean genera Mucor and Rhizopus. In Molecular identification of fungi (pp. 213-250). Springer, Berlin, Heidelberg.
González-Orozco, Carlos E. et al. 2016. Phylogenetic Approaches Reveal Biodiversity Threats under Climate Change. Nature Climate Change 6(12): 1110–14.
Govindarajan, Marimuthu, and Giovanni Benelli. 2016. ?-Humulene and ?-Elemene from Syzygium zeylanicum (Myrtaceae) Essential Oil: Highly Effective and Eco-Friendly Larvicides against Anopheles Subpictus, Aedes Albopictus, and Culex Tritaeniorhynchus (Diptera: Culicidae). Parasitology Research 115(7): 2771–78.
Habisukan, Ummi H. et al. 2021. Diversity of Endophytic Fungi in Syzygium Aqueum. Biodiversitas 22(3): 1129–37.
Hanin, N. A., and P. D. Fitriasari. 2019. Identification of Endophytic Fungi from Fruits and Seeds of Jambolana (Syzygium Cumini L.) Skeels. IOP Conference Series: Earth and Environmental Science 276(1).
Hibbett, D. S., Ohman, A., Glotzer, D., Nuhn, M., Kirk, P., & Nilsson, R. H. 2011. Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences. Fungal biology reviews, 25(1), 38-47.
Hoffmann, K., Discher, S., & Voigt, K. 2007. Revision of the genus Absidia (Mucorales, Zygomycetes) based on physiological, phylogenetic, and morphological characters; thermotolerant Absidia spp. form a coherent group, Mycocladiaceae fam. nov. Mycological research, 111(10), 1169-1183.
Katoch, Meenu, and Shipra Pull. 2017. Endophytic Fungi Associated with Monarda Citriodora, an Aromatic and Medicinal Plant and Their Biocontrol Potential. Pharmaceutical Biology 55(1): 1528–35.
Kothe, Erika, and Katarzyna Turnau. 2018. Editorial: Mycorrhizosphere Communication: Mycorrhizal Fungi and Endophytic Fungus-Plant Interactions. Frontiers in Microbiology 9(DEC): 1–4.
Kumar, Vinay et al. 2019. Endophytic Fungi: Recent Advances in Identification and Explorations. Advances in Endophytic Fungal Research : 267–81.
Kuswytasari, Nengah Dwianita et al. 2019. Plastic Degradation by Coriolopsis Byrsina, an Identified White-Rot, Soil-Borne Mangrove Fungal Isolate from Surabaya, East Java, Indonesia. Biodiversitas 20(3): 867–71.
Li, Shou Jie, Xuan Zhang, Xiang Hua Wang, and Chang Qi Zhao. 2018. Novel Natural Compounds from Endophytic Fungi with Anticancer Activity. European Journal of Medicinal Chemistry 156: 316–43.
Mandla, Rajashekhar. 2018. In Hibitory Effect of Endophytic Trichoderma Species Against Colletotrichum Leaf Spot of Clove and Its Compatibility With. Progressive Research – An International 11 (4) : 2460-2465
Mayasani, N., H. Hikmahtunnazila, W. Lestari, and O. Roanisca. 2019. Kajian Fitokimia Daun Syzygium zeylanicum Menggunakan Metode Microwave Assisted Extraction ( Mae ). Prosiding Seminar Nasional Penelitian & Pengabdian Pada Masyarakat 3: 1–4.
Microbiol, Arch et al. 2016. ANTISTAPHYBASE?: Database of Antimicrobial Peptides ( AMPs ) and Essential Oils ( EOs ) against Methicillin ? Resistant Staphylococcus Aureus ( MRSA ) and Staphylococcus Aureus. Archives of Microbiology 199(2), 215-222.
Nguyen, Van Bon et al. 2019. New Indications of Potential Rat Intestinal ?-Glucosidase Inhibition by Syzygium zeylanicum (L.) and Its Hypoglycemic Effect in Mice. Research on Chemical Intermediates 45(12): 6061–71.
Nomi, Yuri et al. 2012. Isolation and Antioxidant Activity of Zeylaniin A, a New Macrocyclic Ellagitannin from Syzygium zeylanicum Leaves.Journal of Agricultural and Food Chemistry 60(41): 10263–69.
Palanisamy, Uma D., Lai Teng Ling, Thamilvaani Manaharan, and David Appleton. 2011. Rapid Isolation of Geraniin from Nephelium Lappaceum Rind Waste and Its Anti-Hyperglycemic Activity. Food Chemistry 127(1): 21–27.
Pitt, John I., and Ailsa D. Hocking. 2009. Fungi and Food Spoilage (Google EBook). New York, Springer : 536.
Ploetz, Randy C., Jose M. Pérez-Martínez, Aaron J. Palmateer, and Tara L. Tarnowski. 2009. Influence of Temperature, Light Intensity, and Isolate on the Development of Neofusicoccum Parvum-Induced Dieback of Eugenia, Syzygium Paniculatum. Plant Disease 93(8): 804–8.
Potshangbam, Momota, S. Indira Devi, Dinabandhu Sahoo, and Gary A. Strobel. 2017. Functional Characterization of Endophytic Fungal Community Associated with Oryza Sativa L. and Zea Mays L. Frontiers in Microbiology 8(MAR): 1–15.
Rashmi, M, Kushveer Js, and Sarma Vv. 2019. A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity. Mycosphere 10(November): 798–1079.
Schueffler, Anja, and Timm Anke. 2011. Antimicrobial compounds from tree endophytes. In Endophytes of Forest Trees. Springer, Dordrecht, pp. 265-294.
Sheng-yuan, Zhang et al. 2018. “?????? ? - ????????????????? Chemical Constituents from ? -Glucosidase Inhibitory Active Part in Stems and Leaves of Syzygium Jambos. Natural Product Research and Development 30(1): 1950–56.
Shilpa, K.J., and G. Krishnakumar. 2015. Nutritional, Fermentation and Pharmacological Studies of Syzygium Caryophyllatum (L.) Alston and Syzygium zeylanicum (L.) DC Fruits .Cogent Food & Agriculture 1(1): 1018694.
Shofiana, Rosy Husna, Liliek Sulistyowati, and Anton Muhibuddin. 2015. Eksplorasi Jamur Endofit Dan Khamir Pada Tanaman Cengkeh (Syzygium Aromaticum) Serta Uji Potensi Antagonismenya Terhadap Jamur Akar Putih (Rigidoporus Microporus). Jurnal HPT 3(1): 75–83.
Singh, P., Sharma, A., Bordoloi, M., & Nandi, S. P. 2020. Molecular identification of endophytic fungi isolated from medicinal plant. Biointerface Research in Applied Chemistry, 10, 6436-6443.
Tamura, Koichiro et al. 2013. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Molecular Biology and Evolution 30(12): 2725–29.
Tayung, K, BP Barik, DK Jha, and DC Deka. 2011. Identification and Characterization of Antimicrobial Metabolite from an Endophytic Fungus, Fusarium Solani Isolated from Bark of Himalayan Yew. Mycosphere 2(3): 203–13.
Uzma, Fazilath, Chakrabhavi D. Mohan, Chandra N. Siddaiah, and Srinivas Chowdappa. 2019. Endophytic Fungi: Promising Source of Novel Bioactive Compounds. In Advances in endophytic fungal research, Springer, Cham: 243–65.
Walsh, Thomas J., Randall T. Hayden, and Davise H. Larone. 2018. Larone’s Medically Important Fungi. New York: Elsevier.
Watanabe, Tsuneo. 2010. Pictorial Atlas of Soil and Seed Fungi. CRC Press.

Most read articles by the same author(s)

1 2 > >>